This site provides a demonstrative workflow and supporting information for the publication:
Modeling the 2014-2015 Vesicular Stomatitis Outbreak in the United States using an SEIR-SEI Approach
Authors:
Humphreys, Pelzel-McCluskey, Shults, Velazquez Salinas, Bertram, McGregor, Cohnstaedt, Swanson, Scroggs, Fautt, Mooney, Peters, and Rodriguez
Viruses 2024, 16, 1315. https://doi.org/10.3390/v16081315
A webpage based version of the code and results are available at the following link:
Website: https://geoepi.github.io/seir-vector/overview
An interactive dashboard to demonstrate the described SEIR-SEI model is available:
ShinyApps: https://geoepi.shinyapps.io/seir-vector/
All code and data are available for download:
GitHub: https://github.com/geoepi/seir-vector
Large model objects, incidence data, and other archived information are available on the Open Science Framework:
Project OSF site: https://osf.io/vqgxs/